Practical Electron Microscopy and Database

An Online Book, Second Edition by Dr. Yougui Liao (2006)

Practical Electron Microscopy and Database - An Online Book

Chapter/Index: Introduction | A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | Z | Appendix

Phase Extension Procedure

Phase extension procedure, using the magnitudes of the structure factors from ED (electron diffraction) and starting phases from the corresponding EM (electron microscopy), can be employed to improve a high-resolution image. The tangent formula [1] is normally used as the basis of the phase extension,

        tangent formula as basis of the phase extension ---------------------- [3493a]

        tangent formula as basis of the phase extension ------------------------------------------ [3493b]

where,
          αh -- The phase associated with the normalized structure factor Eh
          Eh -- The normalized structure factor
          Fh -- The conventional structure factor
          Σ -- The average value of |Fh|2 for the scattering angle corresponding to h
          ε -- Usually equals unity but can be a small integer depending on the space group and the type of reflection and giving the effect that for all the reflections of that particular type <|Eh|2> = 1.

By substituting Eh with known phases into the right-hand side of Equation 3493a, originally unknown phases can be predicted according to the outcome on the left-hand side.

 

 

 

 

 

[1] Karle J, Hauptman H. 1956. A theory of phase determination for the four types of non-centrosymmetric space groups 1P222, 2P22, 3P12, 3P22. Acta Cryst 9:635–651.